Dr. Marc Höppner
Institution
Contact
Vita
Education/Training
2006 – 2011
PhD degree, Stockholm University, Sweden
2001 – 2006
Studies in Biology, Münster University, Germany
Research Experience/Academic Appointments
Since 2015
Research associate, head of bioinformatics, IKMB, Christian-Albrechts University Kiel
2013 – 2015
Research associate / team leader for the national bioinformatics platform BILS, Uppsala University, Sweden
2011 – 2013
PostDoc, Uppsala University, Sweden
Important Scientific Prizes/Functions
Since 2017
Associate partner in the German Network for Bioinformatics Infrastructure, de.NBI
2013-2015
Head of the national genome annotation platform, Swedish Bioinformatics Infrastructure for Life Sciences (Swedish Elixir node)
Publications
2020
Dynamic interactions within the host-associated microbiota cause tumor formation in the basal metazoan Hydra.
Rathje K, Mortzfeld B, Hoeppner MP, Taubenheim J, Bosch TCG, Klimovich A (2020) PLOS Pathogen. 16(3):e1008375. doi: 10.1371/journal.ppat.1008375
2019
FeaturedComparative analysis of amplicon and metagenomic sequencing methods reveals key features in the evolution of animal metaorganisms
Rausch P, Rühlemann M, Hermes BM, Doms S, Dagan T, Dierking K, Domin H, Fraune S, von Frieling J, Hentschel U, Heinsen F-A, Höppner M, Jahn MT, Jaspers C, Kissoyan KAB, Langfeldt D, Rehman A, Reusch TBH, Roeder T, Schmitz RA, Schulenburg H, Soluch R, Sommer F, Stukenbrock E, Weiland-Bräuer N, Rosenstiel P, Franke A, Bosch T, Baines JF (2019) Microbiome, doi: 10.1186/s40168-019-0743-1
FeaturedThe functional repertoire contained within the native microbiota of the model nematode Caenorhabditis elegans
Zimmermann J, Obeng N, Yang W, Pees B, Petersen C, Waschina S, Kissoyan KAB, Aidley J, Hoeppner MP, Bunk B, Spröer C, Leippe M, Dierking K, Kaleta C*, Schulenburg H* (2019) The ISME Journal. 1-13. * Shared senior authorship doi: 10.1038/s41396-019-0504-y
2018
Differential expression of immune receptors in two marine sponges upon exposure to microbial-associated molecular patterns.
Pita L, Hoeppner MP, Ribes M, Hentschel U (2018); Sci Rep. 8(1):16081.doi: 10.1038/s41598-018-34330-w